AI Platform

GEMS: Genesis Exploration of Molecular Space

The AI operating system for drug discovery, powered by SOTA models

GEMS integrates foundation models, agents, and the exploratory tooling chemists need to generate and triage solutions to challenging chemistry.
01

GEMS: the agentic end-to-end solution

Drug hunters + Agents run their full design cycles 24/7 on GEMS

Chemists use GEMS across the full design cycle: generating candidates, predicting their properties, interrogating the predictions, and deciding what to synthesize. Agents orchestrate the routine steps and surface trade-offs so that chemists can focus on design decisions.
02

Platform Intelligence

GEMS is powered by our industry-leading models for small and medium-size molecule drug discovery

Agents are only as useful as the models they orchestrate. GEMS models are comprehensive and state-of-the-art. GEMS models cover the breadth of predictions required for small and medium-size molecule drug discovery. It’s AI designed from the ground up by elite ML researchers, trained on proprietary (and public) data, and inspired by drug hunters to be maximally useful.
Pearl

Pearl: our industry-leading foundation model for 3D structure prediction

Pearl predicts the 3D structures of protein-ligand complexes at the <1Å RMSD accuracy drug discovery demands. Pearl is trained on physics-based synthetic data proprietary to Genesis, and can be fine-tuned with program-specific data to improve accuracy on individual targets. Chemists can condition Pearl on what they know about their target, steering predictions toward the structures that matter for their program.

Controllable molecular generation

GEMS proposes novel, drug-like, diverse, and synthesizable molecular ideas conditioned on what the chemist is trying to achieve, including ADME, structural, and program-specific constraints. Chemists drive the design strategy, and the platform surfaces candidates worth pursuing.

Potency and selectivity prediction

GEMS integrates structure-based deep learning methods with physical simulation, including molecular dynamics and quantum chemistry, to predict potency and selectivity. This enables Genesis to find drug candidates for challenging targets that lack on-target training data.

ADME property prediction

Using multitask ML models, GEMS predicts 30+ key ADME properties, including solubility, permeability, metabolic stability, and many others. Chemists see signals for drug-likeness on every candidate before deciding what to make.

Controllable molecular generation

Our language models propose novel, drug-like and diverse molecular ideas conditioned on what the chemist is trying to achieve, including ADME, structural, and program-specific constraints. Chemists drive the design strategy, and the platform surfaces candidates worth pursuing.

Potency and selectivity prediction

GEMS integrates structure-based deep learning methods with physical simulation, including molecular dynamics and quantum chemistry, to predict potency and selectivity. This enables Genesis to find drug candidates for challenging targets that lack on-target training data.

ADME prediction

GEMS predicts 30+ key ADME properties using multitask ML models. Chemists see signals for drug-likeness on every candidate before deciding what to make.

03

Platform flywheel

GEMS is actively shaped by the drug hunters across the industry who use it every day.

On collaboration projects, the same chemists and engineers who shape GEMS are deployed alongside partner teams, helping them to realize the value of their data on a platform proven on real drug programs.
The data they generate improves model performance; their needs and judgment shape the tooling itself.

Join Us

Opportunities in AI and Physics Research

Our team is building the AI platform for small-molecule drug discovery, integrating frontier ML with physical simulation. See opportunities in software engineering, machine learning, and computational chemistry.
Software Engineering
Machine Learning
Computational Chemistry
OCTOBER 28, 2026
OCTOBER 28, 2026
OCTOBER 28, 2026

In The News

October 28, 2025

Introducing Pearl: The Next Generation Foundation Model for Drug Discovery